Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922692.1_cds_XP_016471452.1_63793
CDS Infomation

[gene=LOC107793587] [db_xref=GeneID:107793587] [protein=protein MSP1-like] [protein_id=XP_016471452.1] [location=join(2281..2344,2947..3077,3255..3330,4691..4787,4875..4944,5024..5200,5292..5414,6835..6918,16613..16797,16996..17134,17233..17292,17376..17426,17911..17994,18251..18358)] [gbkey=CDS]
Sequence

ATGATGAAAGATGGAATGATTTTGTCACCTGAAGCTGTTTATTATGCCGATTTTTATGAT
TTTGTTTGGTGGTTTCTCATCCTGCCACGGTTTTTCTGTTTACAGGAGGAAGATCTCCTT
AGCACATTTAATAAACAGATTGAAGAAGACAGGAGAATTGTAATAGCTCGTAGTAACCTA
AATGAATTGTACAAGGTTCTGGAAGAGCATGAGCTTTCATGCATTGATTTGTTGCATGTA
AATACTGATGGTGTAATTCTGACAAAGCAGAAAGCTGAAAAAGTTATTGGTTGGGCAAAA
AATCATTACCTGTACACGTGCCTCCAACCATCTATTAAAGGGGATAGATTGTATCTGCCT
CGTGAAAGCCTTGAAGCCACAATTTTGAGGTTGAAGGAGCAGGAAACAATGTCAAAAAAG
CCGTCTCAGAATCTTAAGAATCTTGCCAAGGATGAGTATGAGAACAACTTTGTCTCAGCA
GTCGTTCCACCAGGTGAAATCGGAATCAAATTTGATGATATTGGTGCTCTTGAAGAAGTA
AAGAAGGCACTGAATGAACTTGTAATCCTACCAATGTGGCGACCAGAGCTTTTCTCCCGT
GGAAATCTGTTGCGGCCTTGCAAGGGGATCTTACTTTTTGGGCCTCCTGGAACTGGAAAA
ACTCTTGTTGCTAAGGCGCTTGCAACAGAAGCAGGAGCTAATTTCATTAGTATTACTGGT
TCAACCCTTACATCAAAGTGGTTTGGAGACGCTGAAAAGCTTACCAAGGCACTCTTCTCA
TTTGCCAGTAAGCTGGCTCCTGTAATAATTTTTGTTGATGAGGTTGACAGCTTACTTGGT
GCTCGTGGTGGTTCGTTTGAGCACGAGGCAACCAGAAGAATGCGGAATGAGTTTATGGCT
GCATGGGATGGCTTGAGATCAAAGGAGAACCAGAAGATCCTTATACTTGGTGCAACAAAT
CGTCCCTTTGACCTTGATGATGCTGTTATTCGCCGTTTACCTAGGAGGATATATGTAGAC
CTACCAGATGCAGCAAATCGCGCAAAGATACTAAAGATAATTCTTGCTCGGGAAAATTTG
GAGGCAGATTTCCCGTATGAGAATCTTGCAAATGCAACTGAAGGTTATTCTGGTAGTGAT
TTGAAGAACCTGTGCATTGCGGCAGCTTATAGACCTGTTCAAGAAATACTAGAAGAGGAG
AAGGAGTTGGCCCATATTAGGATACCCAAGTATGAGTCTTATGATGCGGCACGAAAGGTT
GAATCACTGGGAGGTAGAAAAGATGGAATTCCAGTGTTACGACCGCTCAGTGTAGACGAT
TTTATTGAGTCAAAAGCAAAGGTGGGGCCATCAGTCGCATATGATGCAGCGAGCATGAAT
GAGCTGAGAAAATGGAATGATCAGTACGGTGAAGGTGGAAGCAGGAGAAAGTCTCCATTT
GGCTTTTGA

Peptide Sequence

PEP ID

XP_016471452.1
PEP Infomation

PREDICTED: protein MSP1-like [Nicotiana tabacum]
Sequence

MMKDGMILSPEAVYYADFYDFVWWFLILPRFFCLQEEDLLSTFNKQIEEDRRIVIARSNL
NELYKVLEEHELSCIDLLHVNTDGVILTKQKAEKVIGWAKNHYLYTCLQPSIKGDRLYLP
RESLEATILRLKEQETMSKKPSQNLKNLAKDEYENNFVSAVVPPGEIGIKFDDIGALEEV
KKALNELVILPMWRPELFSRGNLLRPCKGILLFGPPGTGKTLVAKALATEAGANFISITG
STLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGSFEHEATRRMRNEFMA
AWDGLRSKENQKILILGATNRPFDLDDAVIRRLPRRIYVDLPDAANRAKILKIILARENL
EADFPYENLANATEGYSGSDLKNLCIAAAYRPVQEILEEEKELAHIRIPKYESYDAARKV
ESLGGRKDGIPVLRPLSVDDFIESKAKVGPSVAYDAASMNELRKWNDQYGEGGSRRKSPF
GF

Transcript Sequence

Gene sequence data has not been registered.